STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0020511Uncharacterized protein. (775 aa)    
Predicted Functional Partners:
chiPu_0013257
ANK_REP_REGION domain-containing protein.
   
0.951
chiPu_0013304
ANK_REP_REGION domain-containing protein.
   
0.951
chiPu_0013258
ANK_REP_REGION domain-containing protein.
   
0.945
chiPu_0013252
RHD domain-containing protein.
  
0.929
chiPu_0029070
RHD domain-containing protein.
  
0.928
chiPu_0006452
RHD domain-containing protein.
  
0.927
chiPu_0027191
IPT/TIG domain-containing protein.
  
0.924
chiPu_0005105
Protein kinase domain-containing protein.
   
 0.922
chiPu_0027818
Protein kinase domain-containing protein.
   
 0.922
chiPu_0004931
Protein kinase domain-containing protein.
   
 0.918
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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