STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0020599DDE Tnp4 domain-containing protein. (207 aa)    
Predicted Functional Partners:
chiPu_0024772
Neurotrophin-3; Seems to promote the survival of visceral and proprioceptive sensory neurons; Belongs to the NGF-beta family.
    
 0.907
chiPu_0018069
Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.778
chiPu_0004620
Uncharacterized protein.
    
 0.763
chiPu_0027558
Uncharacterized protein.
    
 0.763
chiPu_0016431
NGF domain-containing protein.
     
 0.673
chiPu_0006078
Brain-derived neurotrophic factor; Promotes the survival of neuronal populations that are all located either in the central nervous system or directly connected to it; Belongs to the NGF-beta family.
     
 0.661
chiPu_0017351
EGF-like domain-containing protein.
   
 
  0.652
chiPu_0019948
PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family.
   
 
  0.651
chiPu_0007587
Insulin; Insulin decreases blood glucose concentration. It increases cell permeability to monosaccharides, amino acids and fatty acids. It accelerates glycolysis, the pentose phosphate cycle, and glycogen synthesis in liver.
   
 
  0.650
chiPu_0019388
Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.
   
 
  0.616
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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