STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0022649Uncharacterized protein. (1254 aa)    
Predicted Functional Partners:
chiPu_0017033
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
    
  0.835
chiPu_0009812
Uncharacterized protein.
    
  0.733
chiPu_0014777
AP complex subunit beta.
    
  0.733
chiPu_0017065
Uncharacterized protein.
    
  0.703
chiPu_0008713
AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...]
    
  0.681
chiPu_0012454
Uncharacterized protein.
    
  0.681
chiPu_0016737
Alpha_adaptinC2 domain-containing protein.
    
  0.681
chiPu_0012940
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
  0.666
chiPu_0009336
ACB domain-containing protein.
    
  0.664
chiPu_0025503
Uncharacterized protein.
    
  0.664
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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