STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0022077Uncharacterized protein. (115 aa)    
Predicted Functional Partners:
chiPu_0019752
Uncharacterized protein.
    
 
 0.913
chiPu_0009200
Tudor domain-containing protein.
    
 
 0.913
chiPu_0009202
TNase-like domain-containing protein.
    
 
 0.913
chiPu_0009199
Uncharacterized protein.
    
 
 0.913
chiPu_0009423
Phospholipase A2.
    
 0.815
chiPu_0005350
TPR_REGION domain-containing protein.
   
    0.776
chiPu_0033375
Uncharacterized protein.
    
 0.774
chiPu_0006027
DUF3677 domain-containing protein.
    
 0.728
chiPu_0015122
Beta-Casp domain-containing protein.
    
 0.727
chiPu_0011159
Uncharacterized protein.
    
 0.719
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.