STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0022387Uncharacterized protein. (77 aa)    
Predicted Functional Partners:
chiPu_0001287
Uncharacterized protein.
    
  0.975
chiPu_0008339
Uncharacterized protein.
    
  0.656
chiPu_0018544
Uncharacterized protein.
    
 0.586
chiPu_0001570
Uncharacterized protein.
    
 0.586
chiPu_0005078
Uncharacterized protein.
     
 0.534
chiPu_0007971
Protein YIPF.
   
 
  0.525
chiPu_0013244
AP-4 complex subunit epsilon; AP-4 forms a non clathrin-associated coat on vesicles departing the trans-Golgi network (TGN) and may be involved in the targeting of proteins from the trans-Golgi network (TGN) to the endosomal-lysosomal system; Belongs to the adaptor complexes large subunit family.
   
 
  0.525
chiPu_0002676
Uncharacterized protein.
    
  0.522
chiPu_0009110
AP-1 complex subunit gamma.
   
 
  0.505
chiPu_0010262
AP-1 complex subunit gamma.
   
 
  0.505
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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