STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0022140Uncharacterized protein. (620 aa)    
Predicted Functional Partners:
chiPu_0011773
HORMA domain-containing protein.
   
 0.918
chiPu_0006070
Uncharacterized protein.
   
 
 0.907
chiPu_0000671
WD_REPEATS_REGION domain-containing protein.
   
 0.886
chiPu_0019968
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.877
chiPu_0003352
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.877
chiPu_0010811
Uncharacterized protein.
   
 0.870
chiPu_0014079
BUB1 N-terminal domain-containing protein.
   
 0.870
chiPu_0022906
Uncharacterized protein.
    
 
 0.801
chiPu_0003517
Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.791
chiPu_0002188
Uncharacterized protein.
    
 
 0.777
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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