STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0018208SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family. (250 aa)    
Predicted Functional Partners:
chiPu_0016575
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
  
 
 0.970
chiPu_0006268
Uncharacterized protein.
  
 
 0.914
chiPu_0018116
Cytochrome c domain-containing protein.
   
 0.863
chiPu_0004168
Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
    
 0.853
chiPu_0016728
Plug_translocon domain-containing protein.
   
   0.801
chiPu_0016797
Plug_translocon domain-containing protein; Belongs to the SecY/SEC61-alpha family.
   
   0.801
chiPu_0005706
Uncharacterized protein.
  
 
 0.799
chiPu_0015257
Uncharacterized protein.
    
 
 0.799
chiPu_0001643
EVE domain-containing protein.
    
  0.792
chiPu_0017772
Uncharacterized protein.
    
 
 0.761
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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