STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0018269VWFA domain-containing protein. (763 aa)    
Predicted Functional Partners:
chiPu_0015585
WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.
   
 0.983
chiPu_0007679
Uncharacterized protein.
   
 0.975
chiPu_0014475
Uncharacterized protein.
   
 0.975
chiPu_0019544
Protein transport protein sec16; Plays a role in the organization of the endoplasmic reticulum exit sites (ERES), also known as transitional endoplasmic reticulum (tER). Required for secretory cargo traffic from the endoplasmic reticulum to the Golgi apparatus.
   
 0.971
chiPu_0017784
Uncharacterized protein.
   
 0.963
chiPu_0002364
Uncharacterized protein.
   
 0.963
chiPu_0015718
Uncharacterized protein.
   
 0.963
chiPu_0002365
Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.
    
 0.945
chiPu_0015568
Uncharacterized protein; Belongs to the small GTPase superfamily. SAR1 family.
    
 0.945
chiPu_0018107
ANK_REP_REGION domain-containing protein.
   
 0.943
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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