STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0018322Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (317 aa)    
Predicted Functional Partners:
chiPu_0003122
AMP-binding domain-containing protein.
     
 0.897
chiPu_0008615
Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
     
 0.816
chiPu_0030725
Uncharacterized protein.
  
 
 0.808
chiPu_0001346
Aminotran_1_2 domain-containing protein.
    
 0.799
chiPu_0003529
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
     
 0.768
chiPu_0017288
NAD(P)-bd_dom domain-containing protein.
  
 0.755
chiPu_0010346
Methyltransf_11 domain-containing protein.
  
 0.755
chiPu_0017085
FGE-sulfatase domain-containing protein.
  
 0.755
chiPu_0030358
Uncharacterized protein.
  
 0.755
chiPu_0032494
Epimerase domain-containing protein.
  
 0.755
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.