STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0018504TGFb_propeptide domain-containing protein. (259 aa)    
Predicted Functional Partners:
chiPu_0010936
TGF_BETA_2 domain-containing protein.
   
 
 0.857
chiPu_0015538
TGF_BETA_2 domain-containing protein.
  
 
 0.816
chiPu_0009854
Transforming growth factor beta; Belongs to the TGF-beta family.
     
 0.769
chiPu_0001588
Chordin; Belongs to the chordin family.
    
 0.742
chiPu_0022634
TGFb_propeptide domain-containing protein.
     
 0.708
chiPu_0025091
Uncharacterized protein.
     
 0.708
chiPu_0021218
TGFb_propeptide domain-containing protein.
     
 0.679
chiPu_0020322
Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.
    
 0.665
chiPu_0019729
Activin_recp domain-containing protein.
    
 0.665
chiPu_0002687
Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.
    
 0.665
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.