STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0018500PH domain-containing protein. (689 aa)    
Predicted Functional Partners:
chiPu_0020504
Ubiquitin-like domain-containing protein.
    
 0.862
chiPu_0007197
Uncharacterized protein.
    
 0.862
chiPu_0010210
Uncharacterized protein.
    
 0.862
chiPu_0006843
Ubiquitin-like domain-containing protein.
    
 0.860
chiPu_0003190
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 0.856
chiPu_0010687
Uncharacterized protein.
    
 0.842
chiPu_0024417
Ubiquitin-like domain-containing protein.
    
 0.841
chiPu_0001117
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.838
chiPu_0022463
VWFA domain-containing protein.
    
 0.795
chiPu_0022883
Uncharacterized protein.
    
 0.795
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.