Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0018705Uncharacterized protein. (949 aa)    
Predicted Functional Partners:
chiPu_0015376
Uncharacterized protein.
  
 0.987
chiPu_0024044
G6PD_C domain-containing protein.
  
 0.987
chiPu_0001365
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.
  
 0.935
chiPu_0030259
Uncharacterized protein.
  
 0.935
chiPu_0031318
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.
  
 0.935
chiPu_0022097
Glucose-6-phosphate 1-dehydrogenase; Catalyzes the rate-limiting step of the oxidative pentose- phosphate pathway, which represents a route for the dissimilation of carbohydrates besides glycolysis.
  
 0.908
chiPu_0027798
Uncharacterized protein.
  
 0.908
chiPu_0018640
Uncharacterized protein.
   
 
 0.868
chiPu_0000248
TRANSKETOLASE_1 domain-containing protein.
  
 
 0.860
chiPu_0029906
TRANSKETOLASE_1 domain-containing protein.
  
 
 0.860
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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