STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0018942Uncharacterized protein. (695 aa)    
Predicted Functional Partners:
chiPu_0018943
Uncharacterized protein.
 
 
   0.961
chiPu_0024134
Uncharacterized protein.
 
  
   0.938
chiPu_0024605
Uncharacterized protein.
 
 
   0.696
chiPu_0006475
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.676
chiPu_0005827
Homeobox domain-containing protein.
    
   0.650
chiPu_0009489
VPS9 domain-containing protein.
    
   0.650
chiPu_0020116
Integrin beta.
    
 0.641
chiPu_0000377
Integrin beta; Belongs to the integrin beta chain family.
    
 0.641
chiPu_0000416
Integrin beta; Belongs to the integrin beta chain family.
    
 0.641
chiPu_0005117
Integrin beta; Belongs to the integrin beta chain family.
    
 0.641
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.