STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0019105Protein-L-isoaspartate O-methyltransferase. (281 aa)    
Predicted Functional Partners:
chiPu_0004816
Uncharacterized protein.
   
   0.688
chiPu_0018640
Uncharacterized protein.
    
   0.666
chiPu_0011762
Uncharacterized protein.
    
   0.657
chiPu_0004667
Flavodoxin-like domain-containing protein.
  
  
 0.575
chiPu_0026325
Uncharacterized protein; Belongs to the BI1 family.
      
 0.528
chiPu_0013462
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
     
 0.506
chiPu_0004358
Uncharacterized protein.
     
 0.504
chiPu_0005046
Uncharacterized protein.
   
  
 0.492
chiPu_0007858
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
   0.491
chiPu_0002697
Uncharacterized protein.
      
 0.480
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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