STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0018763Uncharacterized protein. (434 aa)    
Predicted Functional Partners:
chiPu_0013103
Uncharacterized protein; Belongs to the DEAD box helicase family.
   
 
 0.983
chiPu_0013414
Uncharacterized protein.
   
 
 0.967
chiPu_0015152
Uncharacterized protein.
    
 
 0.936
chiPu_0009744
Nudix hydrolase domain-containing protein.
    
 
 0.911
chiPu_0000249
mRNA_decap_C domain-containing protein.
    
 
 0.907
chiPu_0031947
NTP_transf_9 domain-containing protein.
    
 
 0.904
chiPu_0008726
mRNA_decap_C domain-containing protein.
    
 
 0.903
chiPu_0005456
WD_REPEATS_REGION domain-containing protein.
    
 
 0.839
chiPu_0013705
YjeF N-terminal domain-containing protein.
    
 
 0.814
chiPu_0023971
YjeF N-terminal domain-containing protein.
    
 
 0.814
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.