STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0019737Sm domain-containing protein. (103 aa)    
Predicted Functional Partners:
chiPu_0003303
Uncharacterized protein.
    
 0.996
chiPu_0002080
N-acetyltransferase domain-containing protein.
    
 0.990
chiPu_0002671
Small nuclear ribonucleoprotein Sm D3.
   
 0.982
chiPu_0012935
Small nuclear ribonucleoprotein Sm D2.
   
 0.982
chiPu_0008008
Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.
   
 0.981
chiPu_0027331
Sm domain-containing protein.
   
 0.981
chiPu_0019131
Small nuclear ribonucleoprotein G.
   
 0.978
chiPu_0012685
Uncharacterized protein.
   
 0.969
chiPu_0002361
Uncharacterized protein.
    
 0.965
chiPu_0004261
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.965
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
Server load: low (22%) [HD]