STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0019861AAA_6 domain-containing protein. (439 aa)    
Predicted Functional Partners:
chiPu_0020970
Uncharacterized protein.
 
     0.950
chiPu_0020009
Uncharacterized protein.
 
     0.950
chiPu_0013232
Uncharacterized protein.
 
     0.950
chiPu_0013234
AAA_6 domain-containing protein.
 
     0.947
chiPu_0022160
Uncharacterized protein.
 
     0.906
chiPu_0016328
Uncharacterized protein.
 
     0.883
PAFAH1B1
Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the peripheral transport of microtubule fragments and the coupling of the nucleus and centrosome. May be required for proliferation of neuronal precursors and neuronal migration; Belongs to the WD repeat LIS1/nudF family.
    
 0.870
chiPu_0008424
Dynein light chain.
    
 0.855
chiPu_0019801
Uncharacterized protein.
 
     0.850
chiPu_0022906
Uncharacterized protein.
    
 0.820
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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