chiPu_0020034 protein (Chiloscyllium punctatum)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

chiPu_0020034

Uncharacterized protein. (67 aa)

Predicted Functional Partners:

chiPu_0008747

0.842

chiPu_0022140

0.737

chiPu_0004497

0.737

chiPu_0006549

0.737

chiPu_0015180

0.737

chiPu_0015361

0.737

chiPu_0017960

0.730

chiPu_0023238

0.730

chiPu_0023109

0.730

chiPu_0006070

0.713

Your Current Organism:

Chiloscyllium punctatum

NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
chiPu_0004497	chiPu_0006070	A0A401S6R2	A0A401SBC6	Uncharacterized protein.	Uncharacterized protein.	0.923
chiPu_0004497	chiPu_0006549	A0A401S6R2	A0A401SCI8	Uncharacterized protein.	EB1 C-terminal domain-containing protein.	0.825
chiPu_0004497	chiPu_0015361	A0A401S6R2	A0A401T2I9	Uncharacterized protein.	Uncharacterized protein.	0.830
chiPu_0004497	chiPu_0020034	A0A401S6R2	A0A401RTX6	Uncharacterized protein.	Uncharacterized protein.	0.737
chiPu_0006070	chiPu_0004497	A0A401SBC6	A0A401S6R2	Uncharacterized protein.	Uncharacterized protein.	0.923
chiPu_0006070	chiPu_0006549	A0A401SBC6	A0A401SCI8	Uncharacterized protein.	EB1 C-terminal domain-containing protein.	0.923
chiPu_0006070	chiPu_0015180	A0A401SBC6	A0A401T205	Uncharacterized protein.	Uncharacterized protein.	0.923
chiPu_0006070	chiPu_0015361	A0A401SBC6	A0A401T2I9	Uncharacterized protein.	Uncharacterized protein.	0.923
chiPu_0006070	chiPu_0020034	A0A401SBC6	A0A401RTX6	Uncharacterized protein.	Uncharacterized protein.	0.713
chiPu_0006070	chiPu_0022140	A0A401SBC6	A0A401RL55	Uncharacterized protein.	Uncharacterized protein.	0.907
chiPu_0006549	chiPu_0004497	A0A401SCI8	A0A401S6R2	EB1 C-terminal domain-containing protein.	Uncharacterized protein.	0.825
chiPu_0006549	chiPu_0006070	A0A401SCI8	A0A401SBC6	EB1 C-terminal domain-containing protein.	Uncharacterized protein.	0.923
chiPu_0006549	chiPu_0008747	A0A401SCI8	A0A401SIQ7	EB1 C-terminal domain-containing protein.	Uncharacterized protein.	0.516
chiPu_0006549	chiPu_0015180	A0A401SCI8	A0A401T205	EB1 C-terminal domain-containing protein.	Uncharacterized protein.	0.825
chiPu_0006549	chiPu_0020034	A0A401SCI8	A0A401RTX6	EB1 C-terminal domain-containing protein.	Uncharacterized protein.	0.737
chiPu_0008747	chiPu_0006549	A0A401SIQ7	A0A401SCI8	Uncharacterized protein.	EB1 C-terminal domain-containing protein.	0.516
chiPu_0008747	chiPu_0015361	A0A401SIQ7	A0A401T2I9	Uncharacterized protein.	Uncharacterized protein.	0.516
chiPu_0008747	chiPu_0020034	A0A401SIQ7	A0A401RTX6	Uncharacterized protein.	Uncharacterized protein.	0.842
chiPu_0015180	chiPu_0006070	A0A401T205	A0A401SBC6	Uncharacterized protein.	Uncharacterized protein.	0.923
chiPu_0015180	chiPu_0006549	A0A401T205	A0A401SCI8	Uncharacterized protein.	EB1 C-terminal domain-containing protein.	0.825