STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0020089Mothers against decapentaplegic homolog. (592 aa)    
Predicted Functional Partners:
chiPu_0012899
Mothers against decapentaplegic homolog.
   
0.982
chiPu_0014510
Mothers against decapentaplegic homolog.
   
0.982
chiPu_0001937
c-SKI_SMAD_bind domain-containing protein.
    
 0.979
chiPu_0010725
c-SKI_SMAD_bind domain-containing protein.
    
 0.972
chiPu_0011430
Mothers against decapentaplegic homolog.
   
0.967
chiPu_0006725
Mothers against decapentaplegic homolog.
   
0.965
chiPu_0008390
Mothers against decapentaplegic homolog.
   
0.965
chiPu_0004131
Uncharacterized protein.
 
 
 0.924
chiPu_0010056
TGF-beta receptor type-2; Transmembrane serine/threonine kinase forming with the TGF- beta type I serine/threonine kinase receptor, TGFBR1, the non- promiscuous receptor for the TGF-beta cytokines TGFB1, TGFB2 and TGFB3. Transduces the TGFB1, TGFB2 and TGFB3 signal from the cell surface to the cytoplasm and is thus regulating a plethora of physiological and pathological processes including cell cycle arrest in epithelial and hematopoietic cells, control of mesenchymal cell proliferation and differentiation, wound healing, extracellular matrix production, immunosuppression and carcinoge [...]
   
 0.913
chiPu_0008554
HMG box domain-containing protein.
    
 0.907
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.