STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0020245Uncharacterized protein. (524 aa)    
Predicted Functional Partners:
chiPu_0023547
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.936
chiPu_0007666
Uncharacterized protein.
    
 0.932
chiPu_0001523
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.929
chiPu_0014036
Trafficking protein particle complex subunit 5; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 0.925
chiPu_0011356
Uncharacterized protein.
    
 0.924
chiPu_0012063
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
    
 0.898
chiPu_0016943
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
    
 0.898
chiPu_0013296
Uncharacterized protein.
    
 0.896
chiPu_0014343
Uncharacterized protein.
    
 0.896
chiPu_0001212
Trafficking protein particle complex subunit; May play a role in vesicular transport from endoplasmic reticulum to Golgi.
    
 0.891
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.