STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0000456Uncharacterized protein. (736 aa)    
Predicted Functional Partners:
chiPu_0005858
Protein kinase domain-containing protein.
   
 0.996
chiPu_0019160
PPM-type phosphatase domain-containing protein.
    
 0.993
chiPu_0019403
TNF receptor-associated factor.
    
 0.993
chiPu_0015763
Protein kinase domain-containing protein.
    
 0.984
chiPu_0028722
CC2-LZ domain-containing protein.
    
 0.977
chiPu_0024193
Death domain-containing protein.
    
 0.972
chiPu_0027535
TNF_2 domain-containing protein; Belongs to the tumor necrosis factor family.
    
 0.971
chiPu_0006843
Ubiquitin-like domain-containing protein.
    
 0.967
chiPu_0005631
Uncharacterized protein.
   
 0.963
chiPu_0020504
Ubiquitin-like domain-containing protein.
    
  0.953
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.