STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0000617Uncharacterized protein. (827 aa)    
Predicted Functional Partners:
chiPu_0007248
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 
 0.750
chiPu_0007731
Calponin-homology (CH) domain-containing protein.
    
 0.494
chiPu_0024637
Uncharacterized protein.
    
 0.494
chiPu_0001768
Calponin-homology (CH) domain-containing protein.
    
 
 0.489
chiPu_0005758
Calponin-homology (CH) domain-containing protein.
    
 
 0.489
chiPu_0002594
PINc domain-containing protein.
    
 
 0.459
chiPu_0015878
Uncharacterized protein.
    
  0.405
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.