STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0000837Uncharacterized protein. (216 aa)    
Predicted Functional Partners:
chiPu_0002070
Uncharacterized protein.
   
 0.981
chiPu_0009101
Uncharacterized protein.
   
 0.909
chiPu_0006088
Uncharacterized protein.
   
 0.887
chiPu_0003522
Uncharacterized protein.
    
 
 0.763
chiPu_0003658
Uncharacterized protein.
    
 
 0.763
chiPu_0010687
Uncharacterized protein.
    
 
 0.763
chiPu_0012063
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
   
 0.752
chiPu_0016943
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
   
 0.752
chiPu_0002736
Uncharacterized protein.
    
 0.732
chiPu_0001328
Uncharacterized protein.
    
 0.701
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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