STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0000890Uncharacterized protein. (1190 aa)    
Predicted Functional Partners:
chiPu_0019595
SMC hinge domain-containing protein.
   
 0.986
chiPu_0003051
Uncharacterized protein.
   
 0.953
chiPu_0004988
Uncharacterized protein.
   
 0.953
chiPu_0008062
Structural maintenance of chromosomes protein.
   
 0.952
chiPu_0007374
Structural maintenance of chromosomes protein.
   
 0.947
chiPu_0033715
SMC_N domain-containing protein.
   
 0.944
EIF3H
Eukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
   
 0.940
chiPu_0019884
Structural maintenance of chromosomes protein.
   
 0.940
chiPu_0007264
Structural maintenance of chromosomes protein.
   
 0.940
chiPu_0016512
AAA_15 domain-containing protein.
   
 0.939
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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