STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0000994Arf-GAP domain-containing protein. (434 aa)    
Predicted Functional Partners:
chiPu_0019999
Arf-GAP domain-containing protein.
   
0.961
chiPu_0014253
Arf-GAP domain-containing protein.
   
0.961
chiPu_0023278
Uncharacterized protein.
   
 0.961
chiPu_0018713
Arf-GAP domain-containing protein.
    
0.937
chiPu_0009253
Arf-GAP domain-containing protein.
    
0.937
chiPu_0017006
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
    
 0.922
chiPu_0011522
SEC7 domain-containing protein.
    
 0.915
chiPu_0017498
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
   
 0.910
chiPu_0000141
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
   
 0.910
chiPu_0019794
Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.
   
 0.910
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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