STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0001637Uncharacterized protein. (563 aa)    
Predicted Functional Partners:
chiPu_0004829
Uncharacterized protein.
    
 0.776
chiPu_0013593
Uncharacterized protein.
    
 0.776
chiPu_0015161
ARID domain-containing protein.
    
 0.702
chiPu_0002090
ARID domain-containing protein.
    
 0.699
chiPu_0006018
BRCT domain-containing protein.
   
  0.688
chiPu_0017065
Uncharacterized protein.
    
  0.667
chiPu_0000671
WD_REPEATS_REGION domain-containing protein.
    
 0.641
chiPu_0009854
Transforming growth factor beta; Belongs to the TGF-beta family.
    
  0.635
chiPu_0010507
Uncharacterized protein.
    
 0.629
chiPu_0004949
Uncharacterized protein.
    
  0.617
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.