STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0001584Uncharacterized protein. (337 aa)    
Predicted Functional Partners:
chiPu_0001583
LisH domain-containing protein.
 
     0.943
chiPu_0007952
Uncharacterized protein.
    
 0.657
chiPu_0013975
Gb3_synth domain-containing protein.
   
 
 0.620
chiPu_0001394
Uncharacterized protein.
    
 0.606
chiPu_0012005
Uncharacterized protein.
    
 0.606
chiPu_0004256
Glyco_trans_2-like domain-containing protein; Belongs to the glycosyltransferase 2 family. GalNAc-T subfamily.
    
  0.604
chiPu_0007434
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
     
 0.597
chiPu_0011297
Uncharacterized protein.
     
 0.597
chiPu_0010974
Protein kinase domain-containing protein.
     
 0.588
chiPu_0000435
Polypeptide N-acetylgalactosaminyltransferase.
     
 0.587
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.