STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0001843Hydrolase_4 domain-containing protein. (336 aa)    
Predicted Functional Partners:
chiPu_0001782
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
     
 0.794
chiPu_0028205
Thiolase_C domain-containing protein.
     
 0.794
chiPu_0029023
Thiolase_C domain-containing protein.
     
 0.794
chiPu_0001866
Abhydrolase_2 domain-containing protein.
     
 0.717
chiPu_0003385
Uncharacterized protein.
     
 0.688
chiPu_0001651
Uncharacterized protein.
     
 0.682
chiPu_0019264
Uncharacterized protein.
  
 
 0.679
chiPu_0032471
Glycos_transf_1 domain-containing protein.
  
 
 0.679
chiPu_0018270
Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.
   
 
 0.677
chiPu_0003460
Uncharacterized protein.
   
 
 0.677
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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