STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0001834Uncharacterized protein. (641 aa)    
Predicted Functional Partners:
chiPu_0018069
Uncharacterized protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
  0.703
chiPu_0011707
Uncharacterized protein.
    
  0.623
chiPu_0027627
Uncharacterized protein.
   
  0.558
chiPu_0001836
Uncharacterized protein.
    
0.556
chiPu_0031269
Ig-like domain-containing protein.
    
 0.556
chiPu_0001911
Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.
    
  0.546
chiPu_0004558
Tyrosine-protein phosphatase non-receptor type; Belongs to the protein-tyrosine phosphatase family. Non- receptor class 2 subfamily.
    
  0.546
chiPu_0000632
Uncharacterized protein.
    
  0.541
chiPu_0000633
Uncharacterized protein.
    
  0.541
chiPu_0000631
Uncharacterized protein.
    
  0.541
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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