STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0002219Uncharacterized protein. (339 aa)    
Predicted Functional Partners:
chiPu_0002447
PH domain-containing protein.
    
 
 0.739
chiPu_0024533
Uncharacterized protein.
    
   0.730
chiPu_0026484
U-box domain-containing protein.
    
   0.730
chiPu_0032912
Uncharacterized protein.
    
   0.730
chiPu_0001169
Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta; Promotes the release of prenylated target proteins from cellular membranes. Modulates the activity of prenylated or palmitoylated Ras family members by regulating their subcellular location. Required for normal ciliary targeting of farnesylated target proteins, such as INPP5E. Modulates the subcellular location of target proteins by acting as a GTP specific dissociation inhibitor (GDI). Increases the affinity of ARL3 for GTP by several orders of magnitude. Stabilizes ARL3-GTP by decreasing the nucleotide [...]
    
 0.717
chiPu_0001287
Uncharacterized protein.
   
 
 0.702
chiPu_0018365
Phorbol-ester/DAG-type domain-containing protein.
   
 
 0.665
chiPu_0018366
Uncharacterized protein.
   
 
 0.665
chiPu_0000958
Uncharacterized protein.
   
 
 0.665
chiPu_0022791
Uncharacterized protein.
   
 
 0.665
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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