STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0002218Uncharacterized protein. (87 aa)    
Predicted Functional Partners:
chiPu_0022824
TLDc domain-containing protein.
   
 
 0.894
chiPu_0008132
NID domain-containing protein.
   
  
 0.825
chiPu_0021954
IRF tryptophan pentad repeat domain-containing protein.
   
 
 0.810
chiPu_0002280
Elp3 domain-containing protein.
   
  
 0.806
chiPu_0020357
Uncharacterized protein.
   
  
 0.752
chiPu_0019306
Uncharacterized protein.
   
  
 0.752
chiPu_0009423
Phospholipase A2.
   
 
  0.617
chiPu_0016133
USP domain-containing protein; Belongs to the peptidase C19 family.
   
  
 0.616
chiPu_0028416
NACHT domain-containing protein.
    
  0.606
chiPu_0030127
TROVE domain-containing protein.
    
  0.606
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.