STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0002775Uncharacterized protein. (577 aa)    
Predicted Functional Partners:
chiPu_0003190
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.889
chiPu_0013020
Uncharacterized protein.
    
  0.803
chiPu_0009617
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
   
   0.727
chiPu_0004910
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
   0.722
chiPu_0010046
Uncharacterized protein.
    
  0.711
chiPu_0019818
Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family.
   
   0.710
chiPu_0021691
Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.
   
   0.697
chiPu_0013997
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
   
   0.695
chiPu_0015803
Uncharacterized protein.
   
   0.695
chiPu_0002743
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
   
   0.693
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.