chiPu_0003330 protein (Chiloscyllium punctatum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

chiPu_0003330

Uncharacterized protein. (204 aa)

Predicted Functional Partners:

chiPu_0003331

0.949

chiPu_0003328

0.947

chiPu_0006833

0.939

chiPu_0003327

0.935

chiPu_0006834

0.927

chiPu_0006832

0.914

chiPu_0024332

0.403

Your Current Organism:

Chiloscyllium punctatum

NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
chiPu_0003327	chiPu_0003328	A0A401S3F6	A0A401S3D2	Uncharacterized protein.	Uncharacterized protein.	0.949
chiPu_0003327	chiPu_0003330	A0A401S3F6	A0A401S3E4	Uncharacterized protein.	Uncharacterized protein.	0.935
chiPu_0003327	chiPu_0003331	A0A401S3F6	A0A401S3I6	Uncharacterized protein.	Uncharacterized protein.	0.927
chiPu_0003327	chiPu_0006833	A0A401S3F6	A0A401SDH2	Uncharacterized protein.	Uncharacterized protein.	0.930
chiPu_0003328	chiPu_0003327	A0A401S3D2	A0A401S3F6	Uncharacterized protein.	Uncharacterized protein.	0.949
chiPu_0003328	chiPu_0003330	A0A401S3D2	A0A401S3E4	Uncharacterized protein.	Uncharacterized protein.	0.947
chiPu_0003328	chiPu_0003331	A0A401S3D2	A0A401S3I6	Uncharacterized protein.	Uncharacterized protein.	0.941
chiPu_0003328	chiPu_0006834	A0A401S3D2	A0A401SDH5	Uncharacterized protein.	Uncharacterized protein.	0.942
chiPu_0003330	chiPu_0003327	A0A401S3E4	A0A401S3F6	Uncharacterized protein.	Uncharacterized protein.	0.935
chiPu_0003330	chiPu_0003328	A0A401S3E4	A0A401S3D2	Uncharacterized protein.	Uncharacterized protein.	0.947
chiPu_0003330	chiPu_0003331	A0A401S3E4	A0A401S3I6	Uncharacterized protein.	Uncharacterized protein.	0.949
chiPu_0003330	chiPu_0006832	A0A401S3E4	A0A401SDA3	Uncharacterized protein.	Uncharacterized protein.	0.914
chiPu_0003330	chiPu_0006833	A0A401S3E4	A0A401SDH2	Uncharacterized protein.	Uncharacterized protein.	0.939
chiPu_0003330	chiPu_0006834	A0A401S3E4	A0A401SDH5	Uncharacterized protein.	Uncharacterized protein.	0.927
chiPu_0003330	chiPu_0024332	A0A401S3E4	A0A401TCI6	Uncharacterized protein.	Uncharacterized protein.	0.403
chiPu_0003331	chiPu_0003327	A0A401S3I6	A0A401S3F6	Uncharacterized protein.	Uncharacterized protein.	0.927
chiPu_0003331	chiPu_0003328	A0A401S3I6	A0A401S3D2	Uncharacterized protein.	Uncharacterized protein.	0.941
chiPu_0003331	chiPu_0003330	A0A401S3I6	A0A401S3E4	Uncharacterized protein.	Uncharacterized protein.	0.949
chiPu_0003331	chiPu_0006832	A0A401S3I6	A0A401SDA3	Uncharacterized protein.	Uncharacterized protein.	0.930
chiPu_0003331	chiPu_0006833	A0A401S3I6	A0A401SDH2	Uncharacterized protein.	Uncharacterized protein.	0.945