STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0003385Uncharacterized protein. (164 aa)    
Predicted Functional Partners:
chiPu_0001782
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.933
chiPu_0028205
Thiolase_C domain-containing protein.
  
 
 0.933
chiPu_0029023
Thiolase_C domain-containing protein.
  
 
 0.933
chiPu_0017775
Uncharacterized protein.
    
 0.889
chiPu_0007193
Uncharacterized protein.
    
 0.889
chiPu_0033479
3HCDH domain-containing protein.
    
 0.889
chiPu_0001167
TPR_REGION domain-containing protein.
    
 0.883
chiPu_0011070
SCP2 domain-containing protein.
  
 
 0.818
chiPu_0028206
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.798
chiPu_0030814
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.798
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.