chiPu_0003923 protein (Chiloscyllium punctatum)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

chiPu_0003923

Uncharacterized protein. (170 aa)

Predicted Functional Partners:

chiPu_0009730

0.983

chiPu_0002690

0.838

chiPu_0015939

0.838

chiPu_0009731

0.832

chiPu_0012670

0.828

chiPu_0002736

0.824

chiPu_0018712

0.801

chiPu_0012063

0.801

chiPu_0014544

0.801

chiPu_0014545

0.801

Your Current Organism:

Chiloscyllium punctatum

NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
chiPu_0002690	chiPu_0003923	A0A401S1R0	A0A401S534	Uncharacterized protein.	Uncharacterized protein.	0.838
chiPu_0002690	chiPu_0009730	A0A401S1R0	A0A401SLK4	Uncharacterized protein.	Uncharacterized protein.	0.657
chiPu_0002690	chiPu_0009731	A0A401S1R0	A0A401SLK6	Uncharacterized protein.	C2 domain-containing protein.	0.416
chiPu_0002690	chiPu_0014544	A0A401S1R0	A0A401T078	Uncharacterized protein.	FYVE-type domain-containing protein.	0.548
chiPu_0002690	chiPu_0014545	A0A401S1R0	A0A401T089	Uncharacterized protein.	Uncharacterized protein.	0.548
chiPu_0002690	chiPu_0018712	A0A401S1R0	A0A401RPF2	Uncharacterized protein.	Uncharacterized protein.	0.548
chiPu_0002736	chiPu_0003923	A0A401S1T1	A0A401S534	Uncharacterized protein.	Uncharacterized protein.	0.824
chiPu_0002736	chiPu_0012063	A0A401S1T1	A0A401ST99	Uncharacterized protein.	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	0.715
chiPu_0003923	chiPu_0002690	A0A401S534	A0A401S1R0	Uncharacterized protein.	Uncharacterized protein.	0.838
chiPu_0003923	chiPu_0002736	A0A401S534	A0A401S1T1	Uncharacterized protein.	Uncharacterized protein.	0.824
chiPu_0003923	chiPu_0009730	A0A401S534	A0A401SLK4	Uncharacterized protein.	Uncharacterized protein.	0.983
chiPu_0003923	chiPu_0009731	A0A401S534	A0A401SLK6	Uncharacterized protein.	C2 domain-containing protein.	0.832
chiPu_0003923	chiPu_0012063	A0A401S534	A0A401ST99	Uncharacterized protein.	Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.	0.801
chiPu_0003923	chiPu_0012670	A0A401S534	A0A401SUW3	Uncharacterized protein.	Uncharacterized protein.	0.828
chiPu_0003923	chiPu_0014544	A0A401S534	A0A401T078	Uncharacterized protein.	FYVE-type domain-containing protein.	0.801
chiPu_0003923	chiPu_0014545	A0A401S534	A0A401T089	Uncharacterized protein.	Uncharacterized protein.	0.801
chiPu_0003923	chiPu_0015939	A0A401S534	A0A401T481	Uncharacterized protein.	Uncharacterized protein.	0.838
chiPu_0003923	chiPu_0018712	A0A401S534	A0A401RPF2	Uncharacterized protein.	Uncharacterized protein.	0.801
chiPu_0009730	chiPu_0002690	A0A401SLK4	A0A401S1R0	Uncharacterized protein.	Uncharacterized protein.	0.657
chiPu_0009730	chiPu_0003923	A0A401SLK4	A0A401S534	Uncharacterized protein.	Uncharacterized protein.	0.983