STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0004018Uncharacterized protein. (672 aa)    
Predicted Functional Partners:
chiPu_0006843
Ubiquitin-like domain-containing protein.
    
  0.931
chiPu_0020504
Ubiquitin-like domain-containing protein.
    
  0.909
chiPu_0002797
Uncharacterized protein.
    
 0.906
chiPu_0013097
Uncharacterized protein.
    
 0.906
chiPu_0027269
Uncharacterized protein.
    
 0.906
chiPu_0027278
Cbl-PTB domain-containing protein.
    
 0.906
chiPu_0029634
Cbl-PTB domain-containing protein.
    
 0.906
chiPu_0007496
F-actin-capping protein subunit beta; F-actin-capping proteins bind in a Ca(2+)-independent manner to the fast growing ends of actin filaments (barbed end) thereby blocking the exchange of subunits at these ends. Unlike other capping proteins (such as gelsolin and severin), these proteins do not sever actin filaments.
    
 
 0.887
chiPu_0000692
SH2 domain-containing protein.
    
 0.837
chiPu_0017951
Uncharacterized protein.
   
 
0.815
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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