STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0004047Treslin_N domain-containing protein. (2177 aa)    
Predicted Functional Partners:
chiPu_0015765
Uncharacterized protein.
    
 
 0.937
chiPu_0025736
Uncharacterized protein.
   
 
 0.917
chiPu_0011548
WD_REPEATS_REGION domain-containing protein.
   
 
 0.894
chiPu_0014147
SKIP_SNW domain-containing protein.
    
 0.881
chiPu_0010324
Uncharacterized protein.
    
 0.879
chiPu_0010811
Uncharacterized protein.
   
 
 0.871
chiPu_0014610
Uncharacterized protein.
   
 0.868
chiPu_0018919
Uncharacterized protein.
   
 0.863
chiPu_0013935
WD_REPEATS_REGION domain-containing protein.
   
 
 0.858
NAT10
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
  
   0.851
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
Server load: low (16%) [HD]