STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0004063Tyrosine-protein kinase receptor. (310 aa)    
Predicted Functional Partners:
chiPu_0021377
Uncharacterized protein.
 
   
  0.937
chiPu_0012676
NGF domain-containing protein.
    
 0.923
chiPu_0004061
Ig-like domain-containing protein.
 
      0.899
chiPu_0004062
Uncharacterized protein.
 
      0.899
chiPu_0024772
Neurotrophin-3; Seems to promote the survival of visceral and proprioceptive sensory neurons; Belongs to the NGF-beta family.
    
 0.893
chiPu_0009094
Uncharacterized protein.
    
 0.870
chiPu_0009948
Uncharacterized protein.
    
 0.870
chiPu_0010266
Uncharacterized protein.
    
 0.870
chiPu_0000820
IRS-type PTB domain-containing protein.
    
 0.857
chiPu_0009299
IRS-type PTB domain-containing protein.
    
 0.857
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.