STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0004346Uncharacterized protein. (851 aa)    
Predicted Functional Partners:
chiPu_0004345
Uncharacterized protein.
 
     0.943
chiPu_0017985
DUF667 domain-containing protein.
    
 
 0.845
chiPu_0017478
DUF3719 domain-containing protein.
    
   0.727
chiPu_0015443
DUF3719 domain-containing protein.
    
   0.727
chiPu_0003409
Beta-hexosaminidase.
    
   0.634
chiPu_0009395
UEV domain-containing protein.
      
 0.553
chiPu_0015972
Uncharacterized protein.
   
  
 0.543
chiPu_0000290
DUF667 domain-containing protein.
    
 
 0.516
chiPu_0000289
DUF667 domain-containing protein.
    
 
 0.516
chiPu_0009013
Uncharacterized protein.
    
 
 0.516
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.