STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0004371Uncharacterized protein. (583 aa)    
Predicted Functional Partners:
chiPu_0003190
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.870
chiPu_0003298
Uncharacterized protein.
   
 0.825
chiPu_0002725
CMP/dCMP-type deaminase domain-containing protein.
     
 0.817
chiPu_0014894
CMP/dCMP-type deaminase domain-containing protein.
     
 0.796
chiPu_0012730
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
   0.743
chiPu_0013997
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
   
   0.735
chiPu_0005539
40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.
   
   0.734
chiPu_0000863
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
   
   0.728
chiPu_0001868
Uncharacterized protein.
   
 
 0.728
chiPu_0017210
Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.
   
   0.727
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.