STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0004385Uncharacterized protein. (240 aa)    
Predicted Functional Partners:
chiPu_0013248
Uncharacterized protein.
    
 0.943
chiPu_0000088
Uncharacterized protein.
    
 0.868
chiPu_0003201
TPR_REGION domain-containing protein.
    
  0.849
chiPu_0006947
TPR_REGION domain-containing protein.
    
 0.847
chiPu_0010526
Uncharacterized protein.
    
 0.846
chiPu_0020844
Uncharacterized protein.
    
 0.844
chiPu_0002430
Protein kinase domain-containing protein.
   
 0.843
chiPu_0015045
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.834
chiPu_0028416
NACHT domain-containing protein.
    
 0.831
chiPu_0030127
TROVE domain-containing protein.
    
 0.831
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.