STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0004393Uncharacterized protein. (379 aa)    
Predicted Functional Partners:
chiPu_0007532
Uncharacterized protein.
     
 0.921
chiPu_0019052
CTP_transf_like domain-containing protein.
    
 0.920
chiPu_0019053
Uncharacterized protein.
    
 0.920
chiPu_0018363
Uncharacterized protein.
  
  
 
0.890
chiPu_0009044
Flavoprotein domain-containing protein.
     
 0.840
chiPu_0019054
BHLH domain-containing protein.
     
 0.809
chiPu_0004631
NACHT domain-containing protein.
    
  0.791
chiPu_0019792
NYD-SP28 domain-containing protein.
    
 
 0.773
chiPu_0018461
DUF89 domain-containing protein; Belongs to the type II pantothenate kinase family.
     
0.771
chiPu_0023394
DFP domain-containing protein.
     
 0.768
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.