STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0004512Uncharacterized protein. (1042 aa)    
Predicted Functional Partners:
chiPu_0012154
RRM domain-containing protein.
    
   0.785
chiPu_0011892
Uncharacterized protein.
   
   0.767
chiPu_0017355
Uncharacterized protein.
    
   0.675
chiPu_0013901
RRM domain-containing protein.
   
    0.631
chiPu_0001209
Tyrosine--tRNA ligase.
      
 0.552
chiPu_0001394
Uncharacterized protein.
   
   0.545
chiPu_0012005
Uncharacterized protein.
   
   0.545
chiPu_0004774
Uncharacterized protein; Belongs to the GST superfamily.
      
 0.517
chiPu_0018605
Uncharacterized protein.
      
 0.502
chiPu_0004484
MYND-type domain-containing protein.
    
 
 0.500
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.