STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0004837RAG2_PHD domain-containing protein. (519 aa)    
Predicted Functional Partners:
chiPu_0004838
V(D)J recombination-activating protein 1; Catalytic component of the RAG complex, a multiprotein complex that mediates the DNA cleavage phase during V(D)J recombination. V(D)J recombination assembles a diverse repertoire of immunoglobulin and T-cell receptor genes in developing B and T- lymphocytes through rearrangement of different V (variable), in some cases D (diversity), and J (joining) gene segments. In the RAG complex, RAG1 mediates the DNA-binding to the conserved recombination signal sequences (RSS) and catalyzes the DNA cleavage activities by introducing a double-strand break [...]
  
 0.998
chiPu_0006328
Uncharacterized protein.
   
 0.955
chiPu_0007585
Uncharacterized protein.
   
 0.955
chiPu_0007903
Uncharacterized protein.
   
 0.955
chiPu_0013702
Uncharacterized protein.
   
 0.955
chiPu_0013933
Uncharacterized protein.
   
 0.955
chiPu_0014390
Uncharacterized protein.
   
 0.955
chiPu_0023792
Uncharacterized protein.
   
 0.955
chiPu_0027768
Uncharacterized protein.
   
 0.955
chiPu_0000762
Uncharacterized protein.
   
 0.933
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
Server load: low (22%) [HD]