STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0005055Ion_trans domain-containing protein; Belongs to the potassium channel family. (527 aa)    
Predicted Functional Partners:
chiPu_0003190
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.976
chiPu_0016645
KCNQ_channel domain-containing protein.
 
 
 0.954
chiPu_0009081
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
   
 0.936
chiPu_0005328
Uncharacterized protein.
   
 0.931
chiPu_0002042
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
  
 0.929
chiPu_0007660
Ribosomal_L7Ae domain-containing protein.
   
 0.928
chiPu_0006096
Uncharacterized protein.
  
 0.926
chiPu_0003989
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 0.925
chiPu_0003608
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 0.924
chiPu_0007411
TRASH domain-containing protein.
  
 0.924
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.