STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0005095Uncharacterized protein. (80 aa)    
Predicted Functional Partners:
chiPu_0006188
Uncharacterized protein.
   
  
 0.750
chiPu_0017379
PUM-HD domain-containing protein.
    
   0.730
chiPu_0008680
PUM-HD domain-containing protein.
    
   0.730
chiPu_0002832
Uncharacterized protein.
   
  
 0.654
chiPu_0016575
Uncharacterized protein; Belongs to the glycosyltransferase 29 family.
    
 
 0.635
chiPu_0006268
Uncharacterized protein.
    
 
 0.594
chiPu_0005706
Uncharacterized protein.
      
 0.526
chiPu_0000496
EngB-type G domain-containing protein.
      
 0.502
chiPu_0020573
Uncharacterized protein; Belongs to the BolA/IbaG family.
      
 0.501
chiPu_0018208
SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family.
      
 0.474
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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