STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0005106Uncharacterized protein. (578 aa)    
Predicted Functional Partners:
chiPu_0007828
SKICH domain-containing protein.
    
 
 0.767
chiPu_0012525
Uncharacterized protein.
   
 
 0.754
chiPu_0012526
SAM domain-containing protein.
   
 
 0.754
chiPu_0002388
Uncharacterized protein.
    
 
 0.735
chiPu_0017355
Uncharacterized protein.
    
 0.727
chiPu_0006054
Uncharacterized protein.
     
 0.727
chiPu_0017080
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
  0.700
chiPu_0014146
RRM domain-containing protein.
    
 0.682
chiPu_0009653
Uncharacterized protein; Belongs to the DEAD box helicase family.
    
 0.602
chiPu_0025667
Uncharacterized protein.
    
 0.602
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.