STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0005361HORMA domain-containing protein. (488 aa)    
Predicted Functional Partners:
chiPu_0003273
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 
 0.671
chiPu_0010613
Knl1_RWD_C domain-containing protein.
   
 
 0.662
chiPu_0011392
RECA_2 domain-containing protein.
   
 
 0.662
chiPu_0010614
DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...]
   
 
 0.635
chiPu_0008380
Protein kinase domain-containing protein.
    
 
 0.623
chiPu_0008381
Uncharacterized protein.
    
 
 0.623
chiPu_0019595
SMC hinge domain-containing protein.
    
 
 0.598
chiPu_0017991
Meiotic nuclear division protein 1 homolog; Required for proper homologous chromosome pairing and efficient cross-over and intragenic recombination during meiosis. Belongs to the MND1 family.
    
 
 0.563
chiPu_0006253
TPR_REGION domain-containing protein.
   
 
 0.537
chiPu_0009967
RECA_2 domain-containing protein.
   
 
 0.537
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.