STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0005336Tr-type G domain-containing protein. (1205 aa)    
Predicted Functional Partners:
chiPu_0003190
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.998
chiPu_0009617
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
  
 
 0.994
chiPu_0001314
Ribosomal_L18e/L15P domain-containing protein; Belongs to the universal ribosomal protein uL15 family.
   
 0.992
chiPu_0002042
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
  
 
 0.992
chiPu_0007310
Ribosomal_L2_C domain-containing protein.
  
 0.992
chiPu_0019818
Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family.
  
 
 0.991
chiPu_0013997
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
   
 0.991
chiPu_0026752
Uncharacterized protein.
   
 0.991
chiPu_0002961
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
  
 0.990
chiPu_0003057
Uncharacterized protein.
  
 
 0.990
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.