STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiPu_0005621IRF tryptophan pentad repeat domain-containing protein. (494 aa)    
Predicted Functional Partners:
chiPu_0019403
TNF receptor-associated factor.
   
 0.870
chiPu_0002384
IRF tryptophan pentad repeat domain-containing protein.
  
0.866
chiPu_0001951
Uncharacterized protein.
   
 0.778
chiPu_0012234
Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response.
   
 0.767
chiPu_0006683
Non-specific serine/threonine protein kinase.
    
 0.766
chiPu_0017771
Uncharacterized protein.
 
  
 0.758
chiPu_0012331
Cytochrome b5 heme-binding domain-containing protein.
     
 0.727
chiPu_0016306
Uncharacterized protein.
    
 0.718
chiPu_0006527
Uncharacterized protein.
    
 0.677
chiPu_0010066
Uncharacterized protein.
    
 0.677
Your Current Organism:
Chiloscyllium punctatum
NCBI taxonomy Id: 137246
Other names: C. punctatum, brownbanded bambooshark
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